Publications


1.
Christopher S. Fry, Jonah D. Lee, Jyothi Mula, Tyler J. Kirby, Janna R. Jackson, Fujun Liu, Lin Yang, Esther E. Dupont-Versteegden, John J. McCarthy, Charlotte A. Peterson, "Inducible depletion of satellite cells in adult, sedentary mice impairs muscle regenerative capacity without affecting sarcopenia", Nature Medicine, Vol. 21, pp. 76-80, 2015.
2.
Nicolas Wein, Adeline Vulin, Maria Sofia Falzarano, Christina Al-Khalili Szigyarto, Baijayanta Maiti, Andrew Findlay, Kristin H. Heller, Mathias Uhlen, Baskar Bakthavachalu, Sonia Messina, Giuseppe Vita, Chiara Passarelli, Francesca Gualandi, Steve D. Wilton, Louise Rodino-Klapec, Lin Yang, Diane M. Dunn, Daniel Schoenberg, Robert B. Weiss, Michael T. Howard, A. Ferlini, Kevin Flanigan, "Translation from a DMD exon 5 IRES results in a functional dystrophin isoform that attenuates dystrophinopathy in humans and mice", Nature Medicine, Vol. 20, No. 9, pp. 992-1000, 2014.
3.
Fujun Liu, Christopher S. Fry, Jyothi Mula, Janna R. Jackson, Jonah D. Lee, Charlotte A. Peterson, Lin Yang, “Automated fiber-type-specific cross-sectional area assessment and myonuclei counting in skeletal muscle”, Journal of Applied Physiology (JAP), Vol. 115, No. 11, pp. 1714-1724, 2013
4.
Fuyong Xing, Lin Yang, "Robust nucleus/cell detection and segmentation for digital pathology and microscopic images: A comprehensive review", accepted to IEEE Reviews in Biomedical Engineering (RBME), 2015.
5.
Xiaofan Zhang, Fuyong Xing, Hai Su, Lin Yang, Shaoting Zhang, "High throughput histopathology image analysis via robust cell segmentation and hashing", Medical Image Analysis (MIA), Vol. 26, No. 1, pp. 306-315, 2015.
6.
Fuyong Xing, Lin Yang, "An automatic learning-based framework for robust nucleus segmentation", accepted to IEEE Transaction on Medical Imaging (TMI), 2015.
7.
Hongyuan Wang, Fuyong Xing, Hai Su, Arnold Stromberg, Lin Yang, “Novel image markers for non-small cell lung cancer classification and survival prediction”, BMC Bioinformatics, 2014.
8.
Mack, David L., Karine Poulard, Melissa A. Goddard, Virginie Latournerie, Jessica M. Snyder, Robert W. Grange, Matthew R. Elverman et al. "Systemic AAV8-mediated gene therapy drives whole-body correction of myotubular myopathy in dogs", Molecular Therapy 25, no. 4 (2017): 839-854.
9.
Tinklenberg, Jennifer, Hui Meng, Lin Yang, Fujun Liu, Raymond G. Hoffmann, Mahua Dasgupta, Kenneth P. Allen et al. "Treatment with ActRIIB-mFc Produces Myofiber Growth and Improves Lifespan in the Acta1 H40Y Murine Model of Nemaline Myopathy", The American journal of pathology 186, no. 6 (2016): 1568-1581.
10.
Li, Frank, Danielle Buck, Josine De Winter, Justin Kolb, Hui Meng, Camille Birch, Rebecca Slater et al. "Nebulin deficiency in adult muscle causes sarcomere defects and muscle-type-dependent changes in trophicity: novel insights in nemaline myopathy", Human molecular genetics 24, no. 18 (2015): 5219-5233.
11.
Meng, Hui, Paul ML Janssen, Robert W. Grange, Lin Yang, Alan H. Beggs, Lindsay C. Swanson, Stacy A. Cossette et al. "Tissue triage and freezing for models of skeletal muscle disease", JoVE (Journal of Visualized Experiments) 89 (2014): e51586-e51586.
12.
Lawlor, Michael W., Marissa G. Viola, Hui Meng, Rachel V. Edelstein, Fujun Liu, Ke Yan, Elizabeth J. Luna et al. "Differential muscle hypertrophy is associated with satellite cell numbers and Akt pathway activation following activin Type IIB receptor inhibition in Mtm1 p. R69C mice", The American journal of pathology 184, no. 6 (2014): 1831-1842.
13.
Hai Su, Fuyong Xing, Lin Yang, "Robust cell detection of histopathological brain tumor images using sparse reconstruction and adaptive dictionary selection", accepted to IEEE Transaction on Medical Imaging (TMI), 2016.
14.
Xiaofan Zhang, Fuyong Xing, Hai Su, Lin Yang, Shaoting Zhang, "High throughput histopathology image analysis via robust cell segmentation and hashing", Medical Image Analysis (MIA), Vol. 26, No. 1, pp. 306-315, 2015
15.
Fuyong Xing, Hai Su, Janna Neltner, Lin Yang, “Automatic Ki-67 counting using robust cell detection and online dictionary learning”, IEEE Transaction on Biomedical Engineering (TBME), Vol. 61, No. 3, pp. 859-870, 2013
16.
Lin Yang, Oncel Tuzel, Wenjin Chen, Peter Meer, Gratian Salaru, Lauri A. Goodell and David J. Foran, "PathMiner: A web-based tool for computer assisted diagnostics in pathology", IEEE Transaction on Information Technology in Biomedicine (TITB), Vol. 13, No. 3, pp. 291-299, 2009
17.
Lin Yang, Wenjin Chen, Peter Meer, Gratian Salaru, Viktors Berstis and David J. Foran, "Virtual microscopy and grid-enabled decision support for large scale analysis of imaged pathology specimens", IEEE Transaction on Information Technology in Biomedicine (TITB), Vol. 13, No. 4, pp. 636-644, 2009
18.
Lin Yang, Peter Meer and David J. Foran, "Unsupervised segmentation based on robust estimation and color active contour models", IEEE Transaction on Information Technology in Biomedicine (TITB) , Vol. 9, No. 3, pp. 475-486, 2005.
19.
Sandra Donkervoort, Ying Hu, Tanya Stojkovic, Nicol Voermans, A. Reghan Foley, Meganne E Leach, Jahannaz Dastgir, Veronique Bolduc, Thomas Cullup, Alix de Becdelievre, Lin Yang, Hai Su, Katherine Meilleur, Alice Schindler, Erik-Jan Kamsteeg, Pascale Richard, Russell Butterfield, Thomas L. Winder, Thomas Crawford, Robert B. Weiss, Francesco Muntoni, Valerie Allamand, Carsten G. Bonnemann, "Mosaicism for dominant COLVI mutations as a cause for intra-familial phenotypic variability", Accepted to Human Mutation, 2014
20.
Michael W. Lawlor, Marissa G. Viola, Hui Meng, Rachel V. Edelstein, Fujun Liu, Ke Yan, Elizabeth J. Luna, Alexandra Lerch-Gaggl, Ray Hoffmann, Christopher R. Pierson, Anna Buj-Bello, Jennifer L. Lachey, Scott Pearsall, Lin Yang, Cecilia Hillard, Alan H. Beggs, "Differential muscle hypertrophy is associated with satellite cell numbers and Akt pathway activation following activin type IIB receptor inhibition in Mtm1 p.R69C mice", Accepted to American Journal of Pathology (AJP), 2014
21.
Oncel Tuzel, Lin Yang, Peter Meer, David J. Foran, "Classification of hematologic malignancies using texton signatures," Pattern Analysis and Applications, 2007
22.
Lin Yang, Peter Meer, and David J. Foran, "Unsupervised segmentation based on robust estimation and color active contour models," IEEE Transactions on Information Technology in Biomedicine, 2005